This would be my number 1 request as well. I've been using PDF expert with dropbox folder sync and it works well in combination with zotfile. I'd love to be able to preserve files where they are and

We could consider adding the ability to replace any native annotations on a PDF with the annotations from the file, which would let you (or ZotFile, using Zotero functionality) export a PDF with embed

In the mean time I'm using Zotfile, and getting frustrated by the fact that in order to see the annotations I make, I have to keep them in the marked-up PDF. I'd rather have the annotations in Zotero

- The possibility of inking when annotating pdfs would be great. I used that feature a lot with my combination Zotero-Zotfile-GoodReader.

It would be great to add the feature to download all pdfs to Zotero iOS at sync time. I have tens of thousands of PDFs and I’ve gotten used to having them all downloaded on my iPad via iCloud/zotfile.

Is there support for linked files (like dropbox and zotfile) planned in the future development? Even after initial public release ?

I assume many folks including myself will be wondering whether there will be a way to tell the app the cloud storage location of our PDFs that have been linked in Zotero desktop with ZotFile. Would be

Do you have backup of your zotero.squlite? how do do you change from linked to stored? i usally doing the other way, from stored to linked through Zotfile

Someone else here might be able to help, but we can't help with ZotFile, sorry.

This sounds like it's mainly an issue for mdnotes (https://github.com/argenos/zotero-mdnotes ) which is designed for notes in the old format and extracted annotations by ZotFile.

I am working with files that include a full date in the date field (y-m-d) and would like to edit the date wildcard in zotfile renaming rules so that it contains the whole date and not just the year -

The way I do it today is with the zotfile and mdnotes plugins. These are the steps I currently go through and it works great:

"No, that makes no sense — you can already generate notes from these new annotations in Zotero. This functionality replaces ZotFile's annotation extraction functionality."

I recently discovered many of Zotero's add-ons, including Zotfile, which I can now add to the "I wish I knew" list. I cannot help to wonder whether there is a way to implement Zotfile this late into

@Venkataragavan: However, what I wish for is that once I annotate and close my PDF in Zotero viewer, the annotations get saved to the actual PDF automatically. That way, it could get synced by Zotfile

automatically. That way, it could get synced by Zotfile so that Zotfile can extract the annotations. Also, if I move to another device and open the pdf on a native pdf reader such as Adobe, I would t

(5) ZotFile-type customisation of the extracted text. I've got my ZotFile set up so that it uses the colour of the PDF-annotation to highlight part of the Zotero-note (e.g., the reference). Will it be

It will, in group libraries. It's not relevant in a user library. (7) One issue with ZotFile has been indicating the correct 'logical page number'. Often the PDF's logical and physical page numbers d

See the other thread I linked to for more details on the notes list and note editor, and post there if you have further comments on that. They can be extracted e.g. using the ZotFile system (as you d

left pane). They can be extracted e.g. using the ZotFile system (as you did), but they cannot be edited in the new system it seems.