Zotero no longer saves Pubmed abstracts or any website
Here is the error report. I have deleted the translator folder but it doesnt help.
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/sync.js" line: 2595}]
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/error.js" line: 38}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
Warning: attempting to write 5592 bytes to preference extensions.zotero.sourceList.persist. This is bad for general performance and memory usage. Such an amount of data should rather be written to an external file.
Warning: attempting to write 5604 bytes to preference extensions.zotero.sourceList.persist. This is bad for general performance and memory usage. Such an amount of data should rather be written to an external file.
Warning: attempting to write 5616 bytes to preference extensions.zotero.sourceList.persist. This is bad for general performance and memory usage. Such an amount of data should rather be written to an external file.
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
1488984975106 addons.update-checker WARN Update manifest for autozotbib@rtwilson.com did not contain an updates property
1488984975160 addons.update-checker WARN Update manifest for zoteroWinWordIntegration@zotero.org did not contain an updates property
1488984975212 addons.update-checker WARN Update manifest for zoteroOpenOfficeIntegration@zotero.org did not contain an updates property
[JavaScript Error: "1488984975217 addons.xpi ERROR Failed to clean updated system add-ons directories.: Win error 2 during operation DirectoryIterator.prototype.next on file C:\Users\Simon P\AppData\Roaming\Zotero\Zotero\Profiles\mjughsg3.default\features (The system cannot find the file specified.
) ((unknown module)) No traceback available" {file: "resource://gre/modules/Log.jsm" line: 751}]
[JavaScript Error: "No items returned from any translator"]
[JavaScript Error: "No items returned from any translator"]
[JavaScript Error: "No items returned from any translator"]
version => 4.0.29.17, platform => Win32, oscpu => Windows NT 10.0; WOW64, locale => en-US, appName => Zotero, appVersion => 4.0.29.17, extensions => Automatic Zotero to BibTeX exporter (0.51, extension), Zotero Word for Windows Integration (3.5.6.SA.4.0.29.17, extension), Adobe Acrobat (15.23.20053.15062, plugin), VLC Web Plugin (2.2.1.0, plugin), Google Update (1.3.32.7, plugin), RocketLife Secure Plug-In Layer (1.0.5.0, plugin), RealTimes Download Plugin (18.1.6.161, plugin), RealPlayer(tm) G2 LiveConnect-Enabled Plug-In (32-bit) (18.1.6.161, plugin), Photo Gallery (16.4.3528.331, plugin), Microsoft Office 2010 (14.0.4730.1010, plugin), Microsoft Office 2010 (14.0.4761.1000, plugin), Silverlight Plug-In (5.1.50901.0, plugin), Java(TM) Platform SE 8 U121 (11.121.2.13, plugin), Java Deployment Toolkit 8.0.1210.13 (11.121.2.13, plugin), Picasa (3.0.0.0, plugin), Shockwave Flash (24.0.0.194, plugin), Verimatrix ViewRight (3.6.0.0, plugin), Zotero LibreOffice Integration (3.5.12.SA.4.0.29.17, extension, disabled)
best regards and thanks Simon
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/sync.js" line: 2595}]
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/error.js" line: 38}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
Warning: attempting to write 5592 bytes to preference extensions.zotero.sourceList.persist. This is bad for general performance and memory usage. Such an amount of data should rather be written to an external file.
Warning: attempting to write 5604 bytes to preference extensions.zotero.sourceList.persist. This is bad for general performance and memory usage. Such an amount of data should rather be written to an external file.
Warning: attempting to write 5616 bytes to preference extensions.zotero.sourceList.persist. This is bad for general performance and memory usage. Such an amount of data should rather be written to an external file.
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
[JavaScript Error: "[Exception... "Component returned failure code: 0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH) [nsILocalFile.initWithPath]" nsresult: "0x80520001 (NS_ERROR_FILE_UNRECOGNIZED_PATH)" location: "JS frame :: chrome://autozotbib/content/autozotbib.js :: Zotero.AutoZotBib.exportAll :: line 26" data: no]" {file: "chrome://zotero/content/xpcom/notifier.js" line: 165}]
1488984975106 addons.update-checker WARN Update manifest for autozotbib@rtwilson.com did not contain an updates property
1488984975160 addons.update-checker WARN Update manifest for zoteroWinWordIntegration@zotero.org did not contain an updates property
1488984975212 addons.update-checker WARN Update manifest for zoteroOpenOfficeIntegration@zotero.org did not contain an updates property
[JavaScript Error: "1488984975217 addons.xpi ERROR Failed to clean updated system add-ons directories.: Win error 2 during operation DirectoryIterator.prototype.next on file C:\Users\Simon P\AppData\Roaming\Zotero\Zotero\Profiles\mjughsg3.default\features (The system cannot find the file specified.
) ((unknown module)) No traceback available" {file: "resource://gre/modules/Log.jsm" line: 751}]
[JavaScript Error: "No items returned from any translator"]
[JavaScript Error: "No items returned from any translator"]
[JavaScript Error: "No items returned from any translator"]
version => 4.0.29.17, platform => Win32, oscpu => Windows NT 10.0; WOW64, locale => en-US, appName => Zotero, appVersion => 4.0.29.17, extensions => Automatic Zotero to BibTeX exporter (0.51, extension), Zotero Word for Windows Integration (3.5.6.SA.4.0.29.17, extension), Adobe Acrobat (15.23.20053.15062, plugin), VLC Web Plugin (2.2.1.0, plugin), Google Update (1.3.32.7, plugin), RocketLife Secure Plug-In Layer (1.0.5.0, plugin), RealTimes Download Plugin (18.1.6.161, plugin), RealPlayer(tm) G2 LiveConnect-Enabled Plug-In (32-bit) (18.1.6.161, plugin), Photo Gallery (16.4.3528.331, plugin), Microsoft Office 2010 (14.0.4730.1010, plugin), Microsoft Office 2010 (14.0.4761.1000, plugin), Silverlight Plug-In (5.1.50901.0, plugin), Java(TM) Platform SE 8 U121 (11.121.2.13, plugin), Java Deployment Toolkit 8.0.1210.13 (11.121.2.13, plugin), Picasa (3.0.0.0, plugin), Shockwave Flash (24.0.0.194, plugin), Verimatrix ViewRight (3.6.0.0, plugin), Zotero LibreOffice Integration (3.5.12.SA.4.0.29.17, extension, disabled)
best regards and thanks Simon
Then run through
https://www.zotero.org/support/troubleshooting_translator_issues
It sounds like you may have deleted your translator folder but not used reset translators afterwards? In that case, you'd expect import to fail.
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/sync.js" line: 2595}]
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/error.js" line: 38}]
version => 4.0.29.17, platform => Win32, oscpu => Windows NT 10.0; WOW64, locale => en-US, appName => Zotero, appVersion => 4.0.29.17, extensions => Automatic Zotero to BibTeX exporter (0.51, extension), Zotero Word for Windows Integration (3.5.6.SA.4.0.29.17, extension), Adobe Acrobat (15.23.20053.15062, plugin), VLC Web Plugin (2.2.1.0, plugin), Google Update (1.3.32.7, plugin), RocketLife Secure Plug-In Layer (1.0.5.0, plugin), RealTimes Download Plugin (18.1.6.161, plugin), RealPlayer(tm) G2 LiveConnect-Enabled Plug-In (32-bit) (18.1.6.161, plugin), Photo Gallery (16.4.3528.331, plugin), Microsoft Office 2010 (14.0.4730.1010, plugin), Microsoft Office 2010 (14.0.4761.1000, plugin), Silverlight Plug-In (5.1.50901.0, plugin), Java(TM) Platform SE 8 U121 (11.121.2.13, plugin), Java Deployment Toolkit 8.0.1210.13 (11.121.2.13, plugin), Picasa (3.0.0.0, plugin), Shockwave Flash (24.0.0.194, plugin), Verimatrix ViewRight (3.6.0.0, plugin), Zotero LibreOffice Integration (3.5.12.SA.4.0.29.17, extension, disabled)
with kind regards and thanks Simon
Are you positive you have the respective connector installed for that browser?
If so, could we get a debug ID from the Zotero connector for loading or reloading a pubmed page, together with the URL for that page, please?
https://www.zotero.org/support/debug_output#zotero_connectors_firefox_chrome_and_safari
I am using Firefox
Surely the connector must be installed because I was able to save websites and items from Pubmed before ? There is no entry for zotero connector in Firefox .
I did the debug the output was blank so nothing to submit to server ?
best regards and thanks
Simon
https://www.zotero.org/download/
I have reinstalled Zotero for firefox as instructed (without uninstalling ). But the debug result is the same. A blank page and the Pubmed entry is not entered into the open subdirectory in Zotero. best regards and thanks Simon
Open the Advanced pane of the Zotero preferences. You can access the Zotero preferences from the gear menu in the Zotero toolbar. (In Zotero for Firefox, you can also access the Zotero preferences via the Firefox preferences.)
Click “Enable” under Debug Output Logging.
Immediately perform the relevant action (syncing, saving, importing, etc.).
Before doing anything else, click “Submit to Zotero Server” in the Advanced pane of the preferences. After uploading the output, Zotero will provide a Debug ID (e.g., “D12345678”) that you can post to the forums. There's no need to post the actual debug output.
But there is no output ?
Is this not the correct sequence of events ?
thanks for attention !
Also, is this the debug output in the Firefox add-on or in Standalone? (It should be in the Firefox add-on)
Here is the output
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/sync.js" line: 2595}]
[JavaScript Error: "Invalid username or password" {file: "chrome://zotero/content/xpcom/error.js" line: 38}]
version => 4.0.29.17, platform => Win32, oscpu => Windows NT 10.0; WOW64, locale => en-US, appName => Zotero, appVersion => 4.0.29.17
=========================================================
(3)(+0000000): Checking for unprocessed full-text content
(5)(+0000000): SELECT itemID FROM fulltextItems WHERE synced=2
(3)(+0000001): No unprocessed full-text content found
But going by what seems like a misunderstanding of how Zotero for Firefox and Zotero Standalone relate as well as that invalid username password,
my guess is that the articles are actually downloading to Zotero for Firefox, which isn't syncing. You're looking in Zotero Standalone, so you're not seeing them.
Typically you'd set the two up to share the same data directory, which doesn't appear to be the case for you:
https://www.zotero.org/support/kb/sharing_data_directory
I'm guessing once you've done this, things will work as you expect.
thanks again for your help -much appreciated
Thank you so much for your help ! Simon
[JavaScript Error: "The note '
<img src="data:image/png;base64,iVBORw0KGgoAAAA…' in your library is too long to sync to zotero.org.
Shorten the note, or delete it and empty the Zotero trash, and then try syncing again." {file: "chrome://zotero/content/xpcom/sync.js" line: 652}]
Anyway -- that message actually just means what it says. You have an image in a note that's preventing you from syncing. You can find the note by searchin for <img src="data:image/png;base64,iV or something along those lines in all fields & tags mode and should then either delete the note and empty the trash or remove the image.
I cannot find "
<img src="data:image/png;base64,iVBORw0KGgoAAAAâ€" using search "all fields and tags" . So please how do I find this in order to delete ? thanks again
b) searched for only part of this (say
img src="data:image/png;base64
But I could not find img src="data:image/png;base64
or any part of this with search box
Tried saving a Pubmed entry.
Result not saved , a blank entry in debug which therefore could not be sent as a report.
D1629235976. But how do I find the img . Do you have any other ideas of how I can find it ? Thanks.
Then I deleted the entries in trash.
But importing from Pubmed to a folder in Zotero still does not work. I have sent the debug report D1624893334. Thank you for your attention.