Sync problems using 1.5b and Jungledisk

My home PC successfully syncs by zotero files, and my PDFs also sync to my Amazon s3 via Jungledisk webdav.
Today, I did a sync at home, which uploaded just a few recently added entries.
Then I went to my work PC, and using portable firefox on USB, and even though I did a sync just a few days ago, it downloaded 147 files, and then uuploaded about 100!
I waitied 10 minutes, and went to the home PC, and zotero then also downloaded 147 files, which it's stilll finishing. I'll bet it then uploads 100 files, but don't have to time to keep watching it...

I've noticed that file dates/times on Jungledisk are not always what I expect them to be when compared to the original sending PC - is that maybe part of the problem here?
Or does it try to reindex the PDFs and then force the sync to think all the PDFs are changed?
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