Best practice question - Two styles in the same document?

For my disseratation I created a style matching the style guidelines of my department. The style contains some extras to facilitate organizing an citing my source material (archival material) e.g it formats items that have the "archive" field filled in a certain way.
Now my question is - If I where to change the style for the entire document most styles don't create output for "archive) etc. What would be the best practice if using a more common style, and still being able to quote some parts accoring to the style I created. One of the styles can be "dead", whit no links to Zotero. Is setting the default export style the answer? Drag and drop (and the format MS Word or other)?
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