references being corrupted in mac word

I'm copying text and references from a previous document, and when I generate a new reference a window pops up saying that I have altered references and offering two choices - ignore, or change once but never again.
I don't really understand the choices, and I'm ending up with dud references if I rearrange things in the document. Neither the "yes" or "no" options work.

  • I deleted the bibliography and regenerated it. For some reason, some of the numbers in the text are not updating, although they are showing up in order in the bibliography.
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