Zotero affecting footnotes

Hi, I'm asking on behalf of a PhD student I've taught Zotero too. I've not come across this but perhaps someone can help.

The student is using Zotero for referencing with Chicago (footnotes). She also adds footnotes manually in Word for commenting/elaborating on issues within her text. If she inserts footnotes with Zotero, would there be any conflict?

e.g. she enters her first footnote with Zotero. She then adds a footnote using Word. Would this appear as 2? If she then adds another footnote using Zotero, would this appear as 3, and so on?

Many thanks
Kevin
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