Problems with sync (Zotero Standalone 4.0.1)
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[Two suggestion for the future, if I may:
(1) It would be great if the RTF-scan function could be updated in EndNote-like fashion, such that placeholders include unique identifiers, work with names including diacritics and can be updated by Zotero to true Zotero-citations including field codes. This way users not only could combine Zotero with software such as Scrivener (which I use for all writing projects), but also keep Word or OpenOffice files clean and uncrowded until the scan.
(2) The possibility to abbreviate journal articles (matched to the Journal Abbr field) is great, but there is not yet a comparable solution for abbreviations of series titles, although this is required for many European styles.
It would be great if a future version of Zotero could include these functions, especially for scholars in the humanities. EndNote has many disadvantages, but it has these two functions for more than 10 years now; this almost prevented me from switching to Zotero.]
2) actually changed recently - journal abbreviations are now matched against an internal list by default (that overrides the journal abbreviation field - you can change that in the Word plugin). If I understand you correctly, you just want a field for series abbreviation, though, correct?
As to (2), what I mean is a field for series abbreviation to which styles can directly or indirectly refer(such as styles now already can use the information in the journal abbreviation field for journal abbreviation).
Should I restart Zotero and try to Restore to Zotero Server (or better from Zotero Server)?
Something is still preventing your error messages from making it into the error reports. Can you generate a Debug ID for the download?
For what it's worth, these sorts of issues with huge initial syncs are part of the reason we're switching to a new sync architecture in Zotero 4.1, so these problems should go away in the not-too-distant future.