Import pdfs from Mendeley to Zotero
I am trying to import from Mendeley to Zotero. Both RIS and Bib files work. But I can't get the pdfs to come over.
Please help.
Thanks
ps. Using Zotero 4.0.8 and Windows 7 32 bit
Here is a a sample entry of Mendeley's RIS export that has a pdf attached to it:
TY - JOUR
T1 - Commentary: the role of appraisal and multisource feedback in the UK General Medical Council's new revalidation system.
A1 - Rubin, Peter
Y1 - 2012/12//
JF - Academic medicine : journal of the Association of American Medical Colleges
VL - 87
IS - 12
SP - 1654
EP - 6
DO - 10.1097/ACM.0b013e3182758c02
UR - http://www.ncbi.nlm.nih.gov/pubmed/23187912
N2 - Beginning in December 2012, all UK doctors will be required to complete a periodic revalidation process conducted by the General Medical Council (GMC) to retain their licence to practise medicine. Regular appraisals, based on the GMC's core guidance for doctors, will be used by responsible officers to evaluate a doctor's practice based on six types of supporting information. Feedback from patients and colleagues, referred to as multisource feedback (MSF), is one element of supporting information that doctors will present at appraisal to support their revalidation.This commentary by the Chair of the GMC expands on the research in this issue by Wright and colleagues to provide an overview of the history of revalidation in the United Kingdom, discuss the role of appraisal in revalidation, and examine the need for and value of MSF in this process. The author highlights the support that the GMC has received from UK patient organizations and ends by focusing on the benefits of revalidation and the expectations for its development in the future.
ER -
Please help.
Thanks
ps. Using Zotero 4.0.8 and Windows 7 32 bit
Here is a a sample entry of Mendeley's RIS export that has a pdf attached to it:
TY - JOUR
T1 - Commentary: the role of appraisal and multisource feedback in the UK General Medical Council's new revalidation system.
A1 - Rubin, Peter
Y1 - 2012/12//
JF - Academic medicine : journal of the Association of American Medical Colleges
VL - 87
IS - 12
SP - 1654
EP - 6
DO - 10.1097/ACM.0b013e3182758c02
UR - http://www.ncbi.nlm.nih.gov/pubmed/23187912
N2 - Beginning in December 2012, all UK doctors will be required to complete a periodic revalidation process conducted by the General Medical Council (GMC) to retain their licence to practise medicine. Regular appraisals, based on the GMC's core guidance for doctors, will be used by responsible officers to evaluate a doctor's practice based on six types of supporting information. Feedback from patients and colleagues, referred to as multisource feedback (MSF), is one element of supporting information that doctors will present at appraisal to support their revalidation.This commentary by the Chair of the GMC expands on the research in this issue by Wright and colleagues to provide an overview of the history of revalidation in the United Kingdom, discuss the role of appraisal in revalidation, and examine the need for and value of MSF in this process. The author highlights the support that the GMC has received from UK patient organizations and ends by focusing on the benefits of revalidation and the expectations for its development in the future.
ER -
Anyway - here's a RIS entry that does have the L1 tag:
TY - JOUR
T1 - Assessing professional competence: from methods to programmes.
A1 - van der Vleuten, Cees P M
A1 - Schuwirth, Lambert W T
Y1 - 2005/03//
KW - Clinical Competence
KW - Clinical Competence: standards
KW - Education, Medical, Undergraduate
KW - Education, Medical, Undergraduate: methods
KW - Learning
KW - Program Evaluation
KW - Reproducibility of Results
JF - Medical education
VL - 39
IS - 3
SP - 309
EP - 17
DO - 10.1111/j.1365-2929.2005.02094.x
UR - http://www.ncbi.nlm.nih.gov/pubmed/15733167
L1 - file:///C:/Users/Anju/AppData/Local/Mendeley Ltd./Mendeley Desktop/Downloaded/van der Vleuten, Schuwirth - 2005 - Assessing professional competence from methods to programmes.pdf
N1 - Mainly focused on assessment tools but has some overarching points about assessment programmes that could relate to appraisal programmes
N2 - INTRODUCTION: We use a utility model to illustrate that, firstly, selecting an assessment method involves context-dependent compromises, and secondly, that assessment is not a measurement problem but an instructional design problem, comprising educational, implementation and resource aspects. In the model, assessment characteristics are differently weighted depending on the purpose and context of the assessment. EMPIRICAL AND THEORETICAL DEVELOPMENTS: Of the characteristics in the model, we focus on reliability, validity and educational impact and argue that they are not inherent qualities of any instrument. Reliability depends not on structuring or standardisation but on sampling. Key issues concerning validity are authenticity and integration of competencies. Assessment in medical education addresses complex competencies and thus requires quantitative and qualitative information from different sources as well as professional judgement. Adequate sampling across judges, instruments and contexts can ensure both validity and reliability. Despite recognition that assessment drives learning, this relationship has been little researched, possibly because of its strong context dependence. ASSESSMENT AS INSTRUCTIONAL DESIGN: When assessment should stimulate learning and requires adequate sampling, in authentic contexts, of the performance of complex competencies that cannot be broken down into simple parts, we need to make a shift from individual methods to an integral programme, intertwined with the education programme. Therefore, we need an instructional design perspective. IMPLICATIONS FOR DEVELOPMENT AND RESEARCH: Programmatic instructional design hinges on a careful description and motivation of choices, whose effectiveness should be measured against the intended outcomes. We should not evaluate individual methods, but provide evidence of the utility of the assessment programme as a whole.
ER -
have you made sure the file
C:/Users/Anju/AppData/Local/Mendeley Ltd./Mendeley Desktop/Downloaded/van der Vleuten, Schuwirth - 2005 - Assessing professional competence from methods to programmes.pdf
exists on your harddisk?
Other than that, I have been reading different threads about importing RIS/ Bibtex with pdfs still attached from Mendeley, could someone please consolidate this in a clear and easy to follow set of instructions for Windows (7)?
Here is the other related thread:
https://forums.zotero.org/discussion/28786/
But I've got to say it is going over my head.
I've got now [no thanks so Mendeley's curious self duplicating mysteries] 35,000+ database. If only one could combine the ease of retrieving metadata for Pdfs from Mendeley with Zotero's duplication function...
Anyhow, would be great if I could retain my Pdfs with the bibtex from Mendeley and have them imported intact into Zotero.
With about 13,000 pdfs, I can't really wait for Google Scholar's 50 pdf limit.
Attaching PDFs should work out of the box when using Mendeley's RIS export. There are a host of issues using BibTex file export (and import) on Windows, so I'd council against that. Differences are marginal anyway.
1. Export library as RIS from Mendeley (go to "all documents", select all (ctrl+a) and the click "Export" from the File Menu. Select .ris as the filetype.
2. Import that file to Zotero (click on import in the gears menu and select the file exported from Mendeley.
That's it and none of this will ever touch your Mendeley database.
I have since started another thread to centralise ideas for migrating from Mendeley to Zotero.
https://forums.zotero.org/discussion/32500/migrating-from-mendeley-to-zotero/
Re Bibtex - generally yes, but due - mainly - to a persistent Mendeley bug (http://feedback.mendeley.com/forums/4941-general/suggestions/1008319-bug-in-exported-bib-file-ver-0-9-7-1-windows-) but also some issues of Zotero's own handling of Windows filepaths in bibtex, it takes many more steps, some of them a bit involved.
So I followed your instruction:
1. Export library as RIS from Mendeley (go to "all documents", select all (ctrl+a) and the click "Export" from the File Menu. Select .ris as the filetype.
2. Import that file to Zotero (click on import in the gears menu and select the file exported from Mendeley.
The most important thing is WHERE one saves the RIS file. I saved it in my Mendeley organised folder, where my renamed pdfs are outputted by Mendeley.
Then I import the RIS file into Zotero - and it WORKS!!!!!! THANK YOU :-)
[Finally an end in sight for these crazy months of endless Mendeley bugs!]
This is the best of all worlds based on the following workflow:
[1] Mendeley batch pdf metadata retrieval ------>
[2] Zotero's automatic duplicates control & search ------> [perhaps for some]
[3] Endnote's bibliographic formatting
With such a huge database, I am afraid there is no "Swiss Army" knife bibliographic management software. But maybe now, there are hybrid approaches to enhance one's productivity [like hands up who have spent more time fixing one's bibliographic software than doing the research and writing itself? Calling to all Mendeley users...]
https://forums.zotero.org/discussion/23749/annotate-attached-pdfs/
Which hasn't worked for me.
I have 25Gb Zotero storage - and would be happy to keep all my pdfs stored there for different computers. I also would like to integrate it with my android tablet.
Perhaps this refers to a different thread, but I am not sure what is the best way to approach the set-up for different computers access. I also have Dropbox, Google Drive and Busybox.
I have read many threads and blogs, but must now say, I have lost sight what is the best way to set up a centralised system.
I have since started a new thread, please refer to this on integrating Zotero Cloud, Android, Dropbox, Google Drive & Windows:
https://forums.zotero.org/discussion/32499/best-practices-for-integrating-zotero-storage-3rd-party-cloud-windows-android/
With button option to either "Locate" or "Cancel".
(@Dan - shouldn't that be added to the error message? Given that in 9 out of 10 cases this is due to files not syncing rather than moved/deleted files, this seems confusing).
Also could I batch rename my pdf with Zotfile in the meantime, and then attempt for another reset for sync to copy from my local onto server?
How long should I assume for changes to be completely repopulated on the server?
http://www.zotero.org/support/kb/files_not_syncing
Regarding:
@TTLP, any particular reason for including
[3] Endnote's bibliographic formatting
in your proposed workflow? What's wrong with Zotero's bibliographic output?
_____
You may have noticed that I've added bracket (for some).
I must say I haven't thoroughly tested this last part myself - if only because I am still principally stuck between phase 1 & 2.
I noticed previously Word's citation index seemed to scramble Mendeley and Zotero... which forced me to abandon one or the other as word add on.
As for Endnote - this came from my professor because he is such a stickler for absolute precise APA protocols. By that, he means everything... (maybe I have opened a can of worms here...?)
But as long as you make sure to keep all your titles in sentence case in Zotero http://www.zotero.org/support/kb/sentence_casing APA style should be flawless.
You need to remove issue numbers for continuously paginated journals, though. Not sure how Endnote handles that, but I don't really see how it can be automated.
As for the sentence case aspect, one can't do batch changes?
edit: and obviously if you want to use Zotero anyway, you can just remove Mendeley field codes and replace the citations with Zotero citations.
What is the known bug?