merging duplicates but not in actual folders?

Hi all,
I couldn't find the answer to this question in the "documentation".

I have 3 different folders under "my library" which contain a lot of duplicates. If I merge all the duplicates, what is the end product? I don't see any changes in the number of citations in my original folder that contain the references.

In the end, I'd like to download the final deduplicated file from Zotero but I can't figure out how to merge the three files after removing duplicates.

Any thoughts?
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